Brain morphing technology simplifies the surgical treatment for movement disorders

By David F. Salisbury
Published: November 18, 2005

A system that morphs brain images can significantly simplify a neurosurgical technique called deep brain stimulation (DBS) that is gaining popularity in the treatment of movement disorders, including tremor, rigidity, stiffness and slowed movement, caused by a variety of neurological conditions ranging Parkinson’s to dystonia to multiple sclerosis to obsessive-compulsive disease.

Dawant Lab
The brain scan in the middle begins as the scan on the left and is transformed into the scan on the right


Since it’s approval in 1998, DBS has proven to be highly effective when standard drug therapies either do not work or have lost their efficacy. However, the fact that it is an extremely long, difficult and expensive operation, which involves implanting electrodes deep in the brain, has limited its availability. In the last seven years, the number of DBS operations performed has grown gradually to about 3,000 annually, although more than 100,000 people a year stand to benefit. Vanderbilt University Medical Center pamphlet on DBS

Image  
Neil Brake  
Electrical engineer Benoit Dawant looking at a model of the human brain  
   
In order to reduce the length, difficulty and risk of the procedure, a team of electrical engineers and neuroscientists at Vanderbilt University has developed a pilot guidance system that automates the most difficult part of the operation: identifying the proper location to insert the electrodes. To work, the electrodes must pass through small nuclei deep in the brain that are about the size of a pea and are not visible in brain scans or to the naked eye. The researchers – writing in a special issue of the journal IEEE Transactions on Medical Imaging published this month– report that the new system can do a better job of identifying the initial location to insert the electrodes than an experienced neurosurgeon.

“The biggest problem with the procedure is that the surgeons cannot see the structure where they have to put the electrode and, as a result, they must spend a considerable amount of time searching for it,” says Benoit Dawant, professor of electrical engineering, computer engineering and radiological sciences at Vanderbilt University, who is developing the guidance system in collaboration with Peter Konrad, associate professor of neurological surgery and biomedical engineering.

  Figure 4
  Dawant lab
  The surgeons identify the peas-sized spot to implant the electrodes by its electrical characteristics. For an unknown reason, it produces a series of unusual electrical spikes, which are shown above.
   
The only way that the target region can be identified is by its electrical characteristics. So the surgeons must first insert a recording electrode and monitor the electrical activity of the neurons that it touches. Sometimes they have to remove and reinsert the electrode two or more times. Sometimes they have to insert three or four electrodes at the same time in order to find the elusive spot.

“I tell patients that it is something like playing a big game of Battleship,” says Konrad, who helped pioneer the procedure. “Like the game, you don’t know where the target is until you’ve made a hit.”

Konrad  
Dana Johnson  
Neurosurgeon Pete Konrad  
   
Each time the surgeons are forced to reinsert the electrode, it increases the risk of damage to the brain and the length of the operation. When surgeons decide that they have hit the right spot, they implant a stimulating electrode and test it to determine if it reduces the patient’s symptoms. Because muscle disorders typically occur only while a person is awake, the patient must remain conscious through the entire procedure.

The operation can take as long as eight to 12 hours to properly place one electrode. (Most patients require two, one in each hemisphere.) “This is extremely rough on patients, who have to be awake through the surgery and have to be locked to the bed,” says Konrad. “Anybody who performs this surgery quickly appreciates the need to trim the procedure down to a shorter process.”

The computer-aided guidance system compensates for variations in the three-dimensional brain structure of each patient, something very difficult for surgeons to do on their own. It reduces operating times by increasing the odds that the surgeons begin searching very close to the target.

  Konrad
  Dana Johnson
  The procedure is long and complicated and tough of patients who must remain conscious but locked to the bed
   
To develop the system, Dawant’s team, which includes doctoral students Pierre-Francois D’Haese, Srivatsan Pallavaram and master’s student Ebru Cetinkaya, began with the brain scans of 21 post-operative DBS patients. Next, the researchers developed a sophisticated, multi-dimensional method for morphing one brain scan into another and used this to combine all 21 brain scans to form a reference brain atlas.

“When we do this, we end up with an atlas with the electrode positions that form a tight cluster,” says Dawant. “That tells us that we have done a very good job of conforming one brain to another.”

Once they developed the atlas, the researchers began testing how well it predicts the invisible target’s location in new patients. They did this by morphing the reference brain, with its cluster of electrode positions, onto a scan of the patient’s brain. They then selected a point in the center of the cluster as their predicted target location.

Figure 2  
Dawant Lab  
Dawant’s group tried two different types of algorithms to create a brain atlas. The simplest allows the computer to rotate, move and zoom brain structures, but treats them as rigid objects. The image on the left is the result of mapping the MRI scans of 20 brains using the “rigid translation” procedure. The images’ lack of detail illustrates the fact that this method is inadequate for the task of guiding electrode placement. As a result, the researchers were forced to use a more complex type of mapping, called a non-rigid transformation. In addition to rotating, translating and zooming brain structures, the non-rigid method allows the computer to deform the shape of individual brain structures. The images in the center are the result of mapping the same 20 brains using this method. The transformed images contain a sharpness and level of detail comparable to the scan of the target brain on the right. This indicates that the method is adequate to guide electrode placement.  
   
In six implantations (two apiece in three patients), Dawant’s team provided predictions to Konrad and his colleague Chris Kao, research assistant professor of neurological surgery, when they were planning the operation. In four cases, the surgeons used the system’s prediction and found the target area in the first pass. In another six implants, the team did not provide their predictions in advance. In five cases, the surgeons had to make a second insertion to locate the target area and in three cases the final implant location was closer to the target identified by the guidance system than it was to the initial location selected by the surgeons.

“Now, with the use of the atlas, what we are basically doing is plugging the patient’s MRI brain scan into the computer and about three to four hours later it spits back a target that we can use to plan the following week’s surgery,” says Konrad. This innovation, along with other improvements such as the use of rapid prototyping to create customized insertion platforms, has substantially reduced the length of the operation: “Now we are down to putting in both electrodes in under five hours: We have reduced a two-day procedure down to five hours.”

  Platform
  Dawant Lab
  In addition to helping surgeons determine the initial location to implant electrodes before the surgery, the engineers have developed an “intraoperative” display that the surgeons can consult during the operation. An example of the system display is shown above.
   
Not only does the guidance system save the patient from the risk of a prolonged procedure or undergoing two procedures, it also should cut hospital costs significantly, Konrad adds.

Despite its invasive nature, Konrad argues that deep brain stimulation has some important fundamental advantages when compared to drug-based therapies for many patients. “Generally, the people who come to us for DBS are people who have had some success treating their condition with drugs, but they have come to the point where they are having so many side-effects that they cancel out the success,” he says. “These are focal diseases that only seriously impact a small portion of the nervous system. When you take a pill you can’t make it just go to the affected area: It goes everywhere, so you get a ying-and-yang effect: You get the positive effect of the drug in the intended target and you get all of the negative effects in all of the other places.”

By contrast, stimulation therapy is directed at just the portion of the nervous system that is damaged, patients do not appear to develop a tolerance to it, so it remains effective for years. And it provides steady and consistent relief so DBS patients do not experience the “on-off” phenomenon experienced by many of the Parkinson’s patients taking drugs, says Konrad.

Konrad  
Dana Johnson  
Using Dawant’s guidance system and other innovations, such as guidance platforms made using rapid prototyping techniques, Konrad, on the left, and his neurosurgery team have reduced the time it takes to implant two electrodes from 8 to 12 hours down to 5 hours  
   
The technique may also be effective in treating other types of conditions as well. For example, recent research suggests that DBS may be effective in treating a broader range of “psychiatric” disorders, such as clinical depression.

“All the work that Dr. Dawant is doing here is creating the infrastructure that will allow us to chart out and map the targets of opportunity for many other diseases that otherwise may not be so easily identified on MRI scans,” says Konrad.

The researchers plan a number of improvements to the guidance system. They have begun to collect data on the effectiveness of the operations and will use that to refine their predictions. They have also set up a system that will collect electrophysiological data from the patient’s brains that is collected during the procedure so they can add it to the brain atlas as well. And finally they intend to begin creating individual atlases for different conditions – Parkinson’s, essential tremor, dystonia, etc. – in case the precise location of the neurological damage may differ.

The research was funded by Vanderbilt University and FNRS, the Belgian Science Foundation.


Next: A patient’s success story



Benoit Dawant’s home page

Peter Konrad’s home page

Vanderbilt University Medical Center pamphlet “Surgery for Deep Brain Stimulation


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